chimeric: --chimMultimapNmax enumeration, and --chimFilter banGenomicN - #149

Open

BenjaminDEMAILLE wants to merge 3 commits into

scverse:mainfrom

BenjaminDEMAILLE:bd/chimeric-multimap

Commits on Jul 29, 2026

feat(chimeric): --chimFilter banGenomicN, and the three multimap knobs

BenjaminDEMAILLE
and
claude
committed
feat(chimeric): --chimMultimapNmax enumerates every chimeric locus
BenjaminDEMAILLE
committed
fix(chimeric): the segment-length gate was one base too permissive
BenjaminDEMAILLE
committed