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qpx support for TMT channels annotations and other fields

enhancementNew feature or requestNew feature or request

Status: Open.

#724 In bigbio/quantms;

· ypriverol opened on Jul 29, 2026

Dissociation method mapping misses the PSI-MS label for HCD (MS:1000422)

Status: Open.

#722 In bigbio/quantms;

· timosachsenberg opened on Jul 28, 2026

Follow-up: add explicit SAGE coverage for consensus feature union introduced in latest PR

bugSomething isn't workingSomething isn't working

Status: Open.

#717 In bigbio/quantms;

· ypriverol opened on Jul 27, 2026

pmultiqc 0.0.39 incompatible with pipeline CLI flags and OpenMS mzTab — SUMMARY_PIPELINE fails

bugSomething isn't workingSomething isn't working

Status: Open.

#713 In bigbio/quantms;

· Cpennica opened on Jul 13, 2026

Discussion: replace ConsensusID with a more robust multi-engine rescoring path

Status: Open.

#707 In bigbio/quantms;

· ypriverol opened on Apr 20, 2026

Implement qpx as output for both TMT and LFQ

high-priority

Status: Open.

Feature

#705 In bigbio/quantms;

· ypriverol opened on Apr 16, 2026

Support the new biosaour for MBR as default quant method in proteomicsLFQ

high-priority

Status: Open.

Feature

#704 In bigbio/quantms;

· ypriverol opened on Apr 16, 2026

Update figure to remove MSstats and DIANN from the workflow

Status: Open.

#703 In bigbio/quantms;

· ypriverol opened on Apr 15, 2026

quantms comet version is null in pmultiqc

Bug fix

high-priority

Status: Open.

#698 In bigbio/quantms;

· ypriverol opened on Apr 13, 2026

CI failure: OpenMS container cannot create config directory

Status: Open.

#691 In bigbio/quantms;

· ypriverol opened on Apr 3, 2026

Typo in openms_peak_picker

bugSomething isn't workingSomething isn't working

Status: Open.

#688 In bigbio/quantms;

· an-altosian opened on Mar 25, 2026

Package pkg_resources not found when running quantmsutilsc

bugSomething isn't workingSomething isn't working

Status: Open.

#685 In bigbio/quantms;

· apalleja opened on Mar 12, 2026