BetaDescribe: Providing Rich Descriptions from Protein Sequences
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Jul 12, 2026 - Python
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protein-annotations
Here are 6 public repositories matching this topic...
GUI tool to add rich annotations to PAW summary files from Swiss-Prot flat text files.
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Jan 23, 2020 - Python
A Transformer Based Deep Learning System for Accurate Annotation of Enzyme Commission Numbers
machine-learning bioinformatics deep-learning transformers pytorch sequences ec-number protein-annotations protbert-model
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Jul 9, 2025 - Python
CoKE: a context-driven paradigm for Scientific LLMs, demonstrating that structured, high-level knowledge is more effective than raw biomolecular sequences for understanding and reasoning.
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Apr 1, 2026 - Python
Protviz is a Python package designed to retrieve and visualize various protein annotations and structural information.
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Sep 14, 2025 - Python
Standalone Python package for annotating protein sequences with biological and physicochemical properties (iFeature, IEDB, SignalP) for reverse vaccinology. Extracted from VacSol-ML(ESKAPE); supports multi-allele MHC-I/II epitope prediction. Provides both a Python API and a CLI
machine-learning bioinformatics machine-learning-algorithms proteomics signal-peptides bioinformatics-analysis python-package epitope-prediction-methods protein-annotation bioinformatics-tool epitope-prediction vaccine-design reverse-vaccinology mhc-binding-prediction protein-annotations proteomics-data-analysis signal-peptide iedb ifeature signal-peptide-detection
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Jul 30, 2026 - Python
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