outbreak-modeling

Here are 2 public repositories matching this topic...

Stephen-Austine / Deterministic-compartmental-models-IR-SIR-for-infectious-disease

Deterministic compartmental models (IR & SIR) for infectious disease dynamics in R from evidence synthesis to vaccination threshold analysis using deSolve & tidyverse.

ggplot2 simulation tidyverse data-visualization r-markdown public-health epidemiology differential-equations r-programming vaccination mathematical-modeling sir-model compartmental-models desolve infectious-disease-modeling outbreak-modeling

Updated Jul 1, 2026

AleClav1214 / monte-carlo-outbreak-simulator

Star

Monte Carlo simulator for outbreak transmission risk that models real superspreading events (a 2020 choir rehearsal, military barracks, university dorms) using literature-cited epidemiological parameters, with uncertainty quantification, intervention modeling, and transmission-chain reconstruction.

python data-science public-health monte-carlo-simulation epidemiology uncertainty-quantification stochastic-modeling superspreading-events outbreak-modeling

Updated Aug 8, 2026
Python

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