Python implementation of MGC+ channel coding for binary and DNA data storage, including encoding, decoding, simulations, and a DNA file storage codec.
Single Read Reconstruction for DNA Data Storage Using Transformers (official implementation)
Formal framework for DNA-based data storage, focusing on reliability engineering, error-bound modeling, and metabolic tradeoff analysis. Repository intended for posting the simulation results of the original project's source code.
DNA Fountain Algorithm
Associated repository for the "Is DNA the KEY to Solving the Data Storage Crisis?" 15 minute discourse podcast on YouTube!
A Python tool for encoding files into DNA sequences and decoding them back.
Biodegradable Digital Logic & Computational Matter. Simulates and models Biological Processing Units (BPUs) using DNA-based storage and organic protein logic circuits to eliminate global electronic waste (E-waste).
Store data in synthetic DNA and get it back. LDPC inner code with belief-propagation and ordered-statistics decoding, Cauchy MDS outer code over GF(2^16). Runs in your browser.
Multi-vendor physically-grounded synthetic DNA dataset generator for DNA data storage research. 7 synthesis profiles (Twist, IDT, DNA Script, Ansa, ETH Zurich, Evonetix), 3 sequencing backends (Illumina, Nanopore, PacBio), 3-layer error injection pipeline with empirical calibration.
Official implementation of the N-Codon Protocol. A biomimetic digital storage architecture for AI models using DNA-inspired fractal compression and epigenetic weight modulation (.bioAI).
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