Some more tests - #4

Open

kwohlfahrt wants to merge 15 commits into

tjs23:masterfrom

kwohlfahrt:master

Commits on Apr 6, 2018

Fix whitespace

Kai Wohlfahrt
authored and
Kai Wohlfahrt
committed
2837bae
Add simple test for splitFastqBarcodes

Kai Wohlfahrt
authored and
Kai Wohlfahrt
committed
725c40d
Configure max line length

Kai Wohlfahrt
authored and
Kai Wohlfahrt
committed
552aa57
Use context manager for input files

Kai Wohlfahrt
authored and
Kai Wohlfahrt
committed
c7f7ab9
Make splitFastqBarcodes gzip-transparent

Kai Wohlfahrt
authored and
Kai Wohlfahrt
committed
f8e8c66
Factor out extension strip

Kai Wohlfahrt
authored and
Kai Wohlfahrt
committed
a2b0ca1
Move and test merge_file_names

Kai Wohlfahrt
authored and
Kai Wohlfahrt
committed
746ed63
Shorten merge_file_names

Kai Wohlfahrt
authored and
Kai Wohlfahrt
committed
70d44c1
Fix merging different length filenames

Kai Wohlfahrt
authored and
Kai Wohlfahrt
committed
2527a37
Preserve separator between file name segments

Kai Wohlfahrt
authored and
Kai Wohlfahrt
committed
9ac2e9d
Auto-generate compressed files for split test

Kai Wohlfahrt
authored and
Kai Wohlfahrt
committed
f0e6666
Ignore pytest cache dir

Kai Wohlfahrt
authored and
Kai Wohlfahrt
committed
3bd420b
Smoke test nuc_processing

Kai Wohlfahrt
authored and
Kai Wohlfahrt
committed
1647cbc
Re-fix flake8 QA

Kai Wohlfahrt
authored and
Kai Wohlfahrt
committed
eeac7ef

Commits on Apr 10, 2018

Use flake8 directly
Kai Wohlfahrt
committed
0ba2a77