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store masks in geff as bool, not uint64 #318

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Merged
TeunHuijben merged 1 commit into from
Jul 13, 2026
Merged

store masks in geff as bool, not uint64 #318

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4 changes: 2 additions & 2 deletions src/tracksdata/graph/_base_graph.py
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Original file line number Diff line number Diff line change
Expand Up @@ -1906,7 +1906,7 @@ def to_geff(
dtype=(
polars_dtype_to_numpy_dtype(v.dtype, compatibility=True)
if k != DEFAULT_ATTR_KEYS.MASK
else np.uint64
else np.bool_
),
varlength=k == DEFAULT_ATTR_KEYS.MASK,
)
Expand Down Expand Up @@ -1940,7 +1940,7 @@ def to_geff(

if DEFAULT_ATTR_KEYS.MASK in node_attrs.columns:
node_dict[DEFAULT_ATTR_KEYS.MASK] = construct_var_len_props(
[mask.mask.astype(np.uint64) for mask in node_attrs[DEFAULT_ATTR_KEYS.MASK]]
[mask.mask.astype(bool) for mask in node_attrs[DEFAULT_ATTR_KEYS.MASK]]
)

edge_dict = {k: {"values": column_to_numpy(v), "missing": None} for k, v in edge_attrs.to_dict().items()}
Expand Down
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