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openproblems-bio / task_ist_preprocessing Public

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Save xenium version in raw-ist#182

Merged

dariarom94 merged 28 commits into

mainopenproblems-bio/task_ist_preprocessing:mainfrom

fixesopenproblems-bio/task_ist_preprocessing:fixesCopy head branch name to clipboard

Jul 22, 2026

Conversation Commits28 (28)Checks Files changed

Merged

Save xenium version in raw-ist#182
dariarom94 merged 28 commits into
mainfrom
fixes

Commits

Commits on Jul 19, 2026

Register cellposev4 in benchmark run scripts

dariarom94
and
claude
committed
fix anndata version mismatch with txsim
dariarom94
committed
add segger to workflow (test)
dariarom94
committed
duplicates when FOV stiching cleaned up
dariarom94
committed

Commits on Jul 20, 2026

chunks issue atera
dariarom94
committed
segger update image
dariarom94
committed
claude fix for segger
dariarom94
committed
Merge branch 'main' into fixes
dariarom94
authored
atera version fix
dariarom94
committed
wf for the custom rnaseq scripts
dariarom94
committed
adjust the loader image name
dariarom94
committed
adjust the memory
dariarom94
committed
troubleshootig edges
dariarom94
committed
Merge branch 'main' into fixes
dariarom94
authored

Commits on Jul 21, 2026

segger update
dariarom94
committed
cell type label correction
dariarom94
committed
fix boundaries
dariarom94
committed
Merge branch 'main' into fixes
dariarom94
authored
OOM fixes
dariarom94
committed
fix code
dariarom94
committed
RCTD
dariarom94
committed
segger to RAPIDS
dariarom94
committed
Merge branch 'main' into fixes
dariarom94
authored

Commits on Jul 22, 2026

fix rctd
dariarom94
committed
segger debug (torchvision)
dariarom94
committed
Merge branch 'main' into fixes
dariarom94
authored
save the xenium version
dariarom94
committed
add atera to datasets
dariarom94
committed

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