Search results

Potentially mis-specified selection in emcncf()

Status: Open.

#209 In mskcc/facets;

· jonasfreimuth opened on Nov 25, 2025

【Zenodo】Optimized SNP Reference VCFs for FACETS Analysis (hg38/GRCh38)【Is this useful?】

Status: Open.

#208 In mskcc/facets;

· kojix2 opened on Oct 21, 2025

support T2T-CHM13 genome

Status: Open.

#207 In mskcc/facets;

· DayTimeMouse opened on Jun 18, 2025

Data normalisation, Annotate FACETS output and how to identify tandem duplication pattern

Status: Open.

#206 In mskcc/facets;

· tanayb001 opened on Jan 25, 2025

Issues in FACETS Tumor Purity Estimation with Nanopore Sequencing Data

Status: Open.

#205 In mskcc/facets;

· Fenne-FU opened on Dec 2, 2024

Purity values NA and suggestions?

Status: Open.

#204 In mskcc/facets;

· jiwonhong95 opened on Nov 20, 2024

snp-pileup for mm10/GRCm38 mouse

Status: Open.

#203 In mskcc/facets;

· ahwanpandey opened on Nov 3, 2024

Enquiry on consistent segments amplified/deleted across most samples

Status: Open.

#202 In mskcc/facets;

· michelle-jahja opened on Oct 1, 2024

How to resolve variability in results due to different random seeds?

Status: Open.

#201 In mskcc/facets;

· ehhfy opened on Sep 19, 2024

mm39 in the preProcSample {facets}

Status: Open.

#200 In mskcc/facets;

· karolina16 opened on Jun 26, 2024

cf.em too low?

Status: Open.

#198 In mskcc/facets;

· THT-sleepy opened on Apr 8, 2024

snp_pileup returning no calls.

Status: Open.

#196 In mskcc/facets;

· apallav21 opened on Jan 10, 2024