chore(deps): sweep major and minor dev dependencies

[jeffreylouden]

Follow-up to #615. Now that validate is green on main, this sweeps the
dependency backlog that had accumulated behind it.

Majors

Package	From	To	Note
typescript	6.0.3	7.0.2	typecheck, test and build all clean
better-sqlite3	12.11.1	13.0.3	requires node >=22, CI runs 24
@types/better-sqlite3	7.6.13	9.6.0
@types/node	25.9.5	26.2.0
nanoid	5.1.16	6.0.1	see below

Minor and patch

@biomejs/biome 2.5.7, marked 18.0.9, prettier 3.9.6, tsx 4.23.12,
@octokit/auth-app 8.3.0, lint-staged 17.3.0.

nanoid deserves the extra scrutiny

scripts/assign-ids.ts uses it to mint permanent entry IDs, and both
the JSON schema (^[A-Za-z0-9_-]{21}$) and check-id-immutability depend
on the exact shape. A silent alphabet or default-size change in a major
would corrupt every ID assigned afterwards, and the test suite would not
notice.

Generated 2,000 IDs under 6.0.1: all 21 characters, all in-alphabet, all
unique. Format unchanged.

The test file diff

That is pnpm lint:fix under biome 2.5.7, which collapses short array
literals onto one line. No semantic change.

Verification

Full suite on a clean tree with everything applied at once:

• pnpm install --frozen-lockfile, pnpm audit --audit-level=high — clean
• lint, typecheck, test, validate, validate:translations, format:check — pass
• generate:schemas, generate:context — no drift
• pnpm build 0 — pass
• changeset status --since=HEAD — pass

Supersedes renovate PRs #606, #605, #604, #601 and #590, which will close
themselves once this lands. Not touched: #592 (pnpm 11.20.0), which changes
packageManager and so alters CI's own install step. That one is worth its
own PR.

No changeset: no data/*.yaml changes, so the Changeset workflow's data
check is skipped by design.

Summary by CodeRabbit

• Chores

  • Updated development tooling and package dependencies to newer versions.

• Tests

  • Reformatted parameterized test cases for improved readability without changing coverage, assertions, or behavior.

[changeset-bot]

⚠️ No Changeset found

Latest commit: 6034a39

Merging this PR will not cause a version bump for any packages. If these changes should not result in a new version, you're good to go. If these changes should result in a version bump, you need to add a changeset.

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[coderabbitai]

No actionable comments were generated in the recent review. 🎉

ℹ️ Recent review info

⚙️ Run configuration

Configuration used: Path: .coderabbit.yaml

Review profile: CHILL

Plan: Pro Plus

Run ID: faaa6091-c172-4160-b6c2-879418168f12

📥 Commits

Reviewing files that changed from the base of the PR and between 9b71080 and 6034a39.

⛔ Files ignored due to path filters (1)

• pnpm-lock.yaml is excluded by !**/pnpm-lock.yaml

📒 Files selected for processing (3)

• package.json
• scripts/__tests__/acronym-exclusions.test.ts
• scripts/__tests__/name-hygiene.test.ts

---

Walkthrough

The PR updates development dependency versions in package.json and reformats parameterized tests in two test files. Test inputs, expected results, and assertions remain unchanged.

Changes

Dependency and test updates

Layer / File(s)	Summary
Development dependency versions package.json	Updated versions for development tooling, type definitions, SQLite, and TypeScript packages.
Parameterized test formatting scripts/__tests__/acronym-exclusions.test.ts, scripts/__tests__/name-hygiene.test.ts	Reformatted parameterized test tables without changing test cases or assertions.

Estimated code review effort: 1 (Trivial) | ~5 minutes

Possibly related PRs

• existential-engineering/catalog#255: Updates overlapping development dependencies in package.json.
• existential-engineering/catalog#289: Updates development dependencies in package.json.
• existential-engineering/catalog#399: Updates overlapping development dependencies and reformats tests.

🚥 Pre-merge checks | ✅ 5

✅ Passed checks (5 passed)

Check name	Status	Explanation
Description Check	✅ Passed	Check skipped - CodeRabbit’s high-level summary is enabled.
Title check	✅ Passed	The title clearly and concisely describes the primary change: updating major and minor development dependencies.
Docstring Coverage	✅ Passed	No functions found in the changed files to evaluate docstring coverage. Skipping docstring coverage check.
Linked Issues check	✅ Passed	Check skipped because no linked issues were found for this pull request.
Out of Scope Changes check	✅ Passed	Check skipped because no linked issues were found for this pull request.

✨ Finishing Touches

📝 Generate docstrings

• Create stacked PR
• Commit on current branch

🧪 Generate unit tests (beta)

• Create PR with unit tests
• Commit unit tests in branch chore/deps/major-sweep

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