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SushiLab

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http://sunagawalab.ethz.ch/
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mVIRs mVIRs Public

Python 13 4
mTAGs mTAGs Public

Python 6 2
kTYPr kTYPr Public

A command-line tool for predicting K-antigen type classifications in Escherichia coli.

Python 1 1

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Showing 10 of 17 repositories

kTYPr_EcoEpidem Public
Code and input files to reproduce the analyses in the manuscript "The natural diversity of E. coli capsules".

SushiLab/kTYPr_EcoEpidem's past year of commit activity

Python 1 GPL-3.0 0 0 0 Updated Apr 2, 2026
kTYPr Public
A command-line tool for predicting K-antigen type classifications in Escherichia coli.

SushiLab/kTYPr's past year of commit activity

Python 1 GPL-3.0 1 1 0 Updated Mar 8, 2026
mTRAc_Manuscript Public

SushiLab/mTRAc_Manuscript's past year of commit activity

Jupyter Notebook 0 0 0 0 Updated Dec 31, 2025
reef-microbiomics-paper Public
This repository contains the code associated with the reef microbiomics manuscript

SushiLab/reef-microbiomics-paper's past year of commit activity

R 3 GPL-3.0 0 0 0 Updated Dec 7, 2025
mTRAc Public
MetaTRAnscriptomic growth Classifier

SushiLab/mTRAc's past year of commit activity

Python 1 GPL-3.0 0 0 0 Updated Nov 22, 2025
omdb-download Public

SushiLab/omdb-download's past year of commit activity

Python 1 GPL-3.0 0 0 0 Updated Jul 15, 2025
NATIONAL_FUTURE_DAY_TEA Public
Contains scripts for the kids to run at national future day.

SushiLab/NATIONAL_FUTURE_DAY_TEA's past year of commit activity

0 GPL-3.0 0 0 0 Updated Nov 13, 2024
coralmicrobiome-hostbiodiversity Public

SushiLab/coralmicrobiome-hostbiodiversity's past year of commit activity

R 0 0 0 0 Updated Nov 13, 2024
IMB_Amplicon_Pipeline Public
Code from the GENERAL_METAB_ANALYSIS_PAN pipeline.

SushiLab/IMB_Amplicon_Pipeline's past year of commit activity

Python 2 GPL-3.0 1 0 0 Updated Sep 3, 2024
mVIRs Public

SushiLab/mVIRs's past year of commit activity

Python 13 GPL-3.0 4 2 0 Updated Feb 29, 2024

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