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1. ComputationalAgronomy/ednabp ComputationalAgronomy/ednabp Public

   A bioinformatics pipeline for processing sequencing data including quality control, taxonomic assignment, and diversity analysis.

   Python 7

2. PollEncOuNt PollEncOuNt Public

   The purpose of this project is to count the number of alive and dead pollens in an image.

   Python 2

3. ComputationalAgronomy/seq-cluster-eval ComputationalAgronomy/seq-cluster-eval Public

   A pipeline for evaluating clustering performance on simulated DNA sequences using dimensionality reduction and clustering.

   Python

4. SeaKrige SeaKrige Public

   SeaKrige: spatial interpolation using kriging with obstacle-avoiding path distancess

   Python

5. ComputationalAgronomy/Demultiplex_practice ComputationalAgronomy/Demultiplex_practice Public

   A Python practice project implementing demultiplexing for sequencing reads, separating reads by index

   Python

6. Reef3D-Viewer Reef3D-Viewer Public

   A demo of photogrammetry-based 3D modeling of a coral reef and downstream complexity analysis

   HTML