docs: content wave 1 (reference + how-to pages)#449
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Add the curated public-API contract page (grouped @ref links to the canonical docstrings) and expand the Library nav section in make.jl to hold the new per-category reference pages alongside the existing full index (lib/lib.md, now anchored as @id lib_index). Content-neutral: lib/lib.md stays the canonical @autodocs catch-all. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
Category reference for the MPS state types via @docs; canonical=false (canonical home remains lib/lib.md), mirroring the man/algorithms.md convention. Quasiparticle types omitted pending docstrings (REVIEW flag). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
Category reference for MPO and Hamiltonian types via @docs; canonical=false. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
Category reference for the ground-state interface and algorithms via @docs; canonical=false. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
Add a how-to guide with runnable recipes for constructing FiniteMPS, InfiniteMPS, WindowMPS, and MultilineMPS (random/initializer/element-type, product states, from tensors, multi-site unit cells, and U(1)-symmetric states), and introduce the How-to nav section in make.jl. All examples are @example blocks verified by the full build. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
Add a how-to guide for inspecting, growing (RandExpand/OptimalExpand), and reducing (SvdCut) bond dimension, truncation schemes, dynamic growth via DMRG2/IDMRG2 and find_groundstate(...; trscheme), and algorithm chaining with &. All examples verified by the full build. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
Add a how-to guide for local and multi-site expectation values (expectation_value), two-point correlators (correlator, incl. range form), full-MPO energies, and the energy variance convergence diagnostic. Wire the page into the How-to nav. All examples verified by the full build. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
Reflow prose to one sentence per line (semantic line breaks) and run the Runic formatter over the Julia code blocks across the Wave 1 reference and how-to pages. Whitespace/style only; no content or API changes, full build still green. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
Add 20 entries to the "Publications using MPSKit" list: 17 from the append-candidates review plus 3 found via web search (staelens2026, yang2026, zemlevskiy2026). Introduce a 2026 section and extend 2025. - Verified every arXiv ID / DOI resolves to a real paper. - Upgraded published preprints: vancraeynestdecuiper2026 to @Article (SciPost Phys. Lect. Notes 128); added arXiv eprints to the already published zong2026pseudogap, vandamme2025pseudogenerators, sommer2025. - Flagged with % NOTE the entries whose MPSKit citation could not be independently confirmed (lu2026 cites it only in its bibliography). Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
…volution, excitations) Category reference pages grouping the exported observables/analysis, bond-dimension, time-evolution, and excitation docstrings via `@docs; canonical=false`, mirroring the existing lib/ page structure. Every listed symbol verified exported with an attached docstring against src/. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
Two task-oriented how-to pages following the observables.md template: - howto/hamiltonians.md: finite/infinite MPO Hamiltonians from local terms, boundary-condition conversion, and window Hamiltonians. - howto/entanglement.md: entanglement entropy and spectrum from gauge tensors. All @example blocks verified to execute against real MPSKit; physics claims flagged with REVIEW for maintainer sign-off. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
Adds howto/{hamiltonians,entanglement}.md to the How-to section and
lib/{bond_dimension,time_evolution,excitations,observables}.md to the Library section,
ordered to mirror the public API surface in lib/public.md.
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
Incorporate post-merge review feedback (docstring/wording only): - changebond docstring: drop inaccurate "in place", "enriched" -> "expanded" - OptimalExpand: reword "does not alter the state" -> "state-preserving" to avoid implying out-of-place operation - TDVP: "enriches" -> "expands" the bond Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
Contributor
|
After the build completes, the updated documentation will be available here |
Apply the new docstring style guide (docs/DOCSTRING_STYLE.md) across all of src/. Single-hash section headers, canonical section order and names (`Keyword Arguments`, not `Keywords`), dash bullets with types only where they earn their place, spaces around `=` in defaults and after commas in type-parameter lists. Templates applied: - A1 (`@kwdef` algorithm/config structs): $(TYPEDEF) + # Fields via $(TYPEDFIELDS) + # See also naming the consuming driver(s) + # References. - A2 (container/data types): $(TYPEDEF) + # Constructors + flat # Arguments/# Keyword Arguments + # Properties + # Notes. - B (user-facing verbs): stacked signatures with -> returns, # Arguments, # Keyword Arguments, # Returns. Also documents three previously-undocumented exports (find_groundstate!, leftenv, rightenv) and adds <!-- REVIEW --> flags for pre-existing doc inaccuracies surfaced during the sweep (non-existent Defaults.solver / Defaults.trscheme references, MPOHamiltonian constructor signatures with no matching methods) for maintainer follow-up. Verified: MPSKit precompiles and the full doctest suite passes. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
Address the batch of accurate/verifiable REVIEW comments left throughout the docs and package docstrings: - MPOHamiltonian: retarget the docstring constructor signatures and example to the concrete FiniteMPOHamiltonian / InfiniteMPOHamiltonian entry points (the MPOHamiltonian(lattice, ...) methods do not exist). - excitations umbrella docstring: drop the nonexistent `solver = Defaults.solver` default and the oversimplified FiniteExcited `init` default; describe the real forwarding/default behaviour. - ChepigaAnsatz2: document the real field defaults (Arnoldi(; krylovdim=30, tol=1e-10, eager=true) and notrunc()). - time_evolve / timestep: `alg` is a required positional argument, not defaulted to TDVP; correct both docstrings accordingly. - Fix a used-before-assignment bug in the InfiniteMPO QuasiparticleAnsatz excitations method (EffectiveExcitationHamiltonian(H_eff, ...) -> H). - observables reference page: surface the known source-status concerns for expectation_value(::MultilineMPS, ::MultilineMPO) and variance(::InfiniteQP, ::InfiniteMPOHamiltonian) as !!! warning admonitions. Doctests pass. Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
Maintainer-confirmed resolutions for the remaining REVIEW comments: - hamiltonians.md: add a short TFIM description (X⊗X coupling, transverse field g along Z, quantum phase transition at g=1). - observables.md / entanglement.md: drop the connected-correlator, area-law, and sector-spectrum REVIEWs, leaving the text neutral (no phase-dependent physical interpretation asserted). - entanglement.md: replace the random-ψ∞ REVIEW with a !!! note clarifying it is not a converged ground state and pointing to find_groundstate. - entanglement.md: drop the WindowMPS REVIEW after verifying entropy(::WindowMPS, site) runs. - finite_envs.jl: drop the left/right environment REVIEWs; the wording matches the code (GRs[ind+1] contracts sites ind+1..end, gauge-compatible with the tensor at site ind, and mirror for leftenv). No REVIEW comments remain in src/ or docs/src/. Doctests pass. Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
…es, citation - CHANGELOG.md now canonical at repo root (visible on GitHub); make.jl copies it into docs/src at build time, generated copy gitignored - add CONTRIBUTING.md, issue templates (bug/question), PR template - CITATION.cff bumped to v0.13.13 (tag date 2026-06-09) - README gains a Citing section with BibTeX Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
Replace the bare auto-generated title list with a curated gallery: difficulty ordering within each grouping, 1-2 sentence teasers stating the physics question and MPSKit features showcased, and thumbnail figures from the existing example outputs. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
The trailing CLOSING NOTES maintainer-comment blocks claimed the pages' outputs were unverified and listed make.jl changes that have since landed. All @example blocks in the three pages were re-verified to execute end-to-end against the current package (32/32 pass, no code changes needed). Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
First page of the tutorial track: prerequisites, project environment, the full recommended package set with one-line roles, a verified smoke-test @example (TFIM Hamiltonian + FiniteMPS), and troubleshooting notes. Registered a Tutorials section in the nav. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
index.md now lists the full environment the documentation actually uses (MPSKit, TensorKit, TensorOperations, MPSKitModels, TensorKitTensors, Plots) with one-line roles, including the verified note that truncrank reaches users via TensorKit's re-export from MatrixAlgebraKit. howto/states.md and howto/bond_dimension.md gain a packages-used preamble linking the installation tutorial. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
- remove the empty man/lattices.md stub from nav and delete it; the forward reference in man/operators.md now points to MPSKitModels docs - fix off-by-one comment (3-site chain) in man/operators.md - repair garbled finite-excitations LaTeX in man/algorithms.md, formula verified against the FiniteExcited implementation - verbosity=false -> verbosity=0 in the leading-boundary snippet - fix empty MKL.jl link in man/parallelism.md - make hidden @setup imports visible in man/operators.md (13/13 blocks re-verified to execute) - add packages-used preambles to the remaining three how-to pages Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
…ation_value unit-cell convention The i < j precondition previously only logged @error and continued into a meaningless contraction, while howto/observables.md promised an error. Also add a docstring note that expectation_value of an infinite operator returns the unit-cell total, not a per-site value. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
Maintainer decisions from the round-1 review walkthrough (2026-07-04): - delete the 22 confirmed REVIEW flags; physics framing stands as written - fix the DMRG log description (Galerkin error + energy, not 'improvement') - switch the finite magnetization sweeps (tutorial section 5 and the example's finite branch) from periodic_boundary_conditions to the open FiniteChain, and re-verify both empirically - rewrite the abs()/symmetry-breaking story: exact finite-L ground state is symmetric; DMRG lands on a broken branch because it carries less entanglement; genuine SSB only in the thermodynamic limit - align crossover prose with the verified runs: the finite-chain drop is an algorithm-selection effect below g = 1, the infinite curve pins the transition at g = 1 (two new REVIEW flags mark this changed story) - state correlation_length units; soften 'maximally entangled' - re-render the TFIM example (figures + index.md + notebook) Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
…solve xy-finiteT todos - verbosity = 0 for the log-dumping ground-state calls in 1.ising-cft, 3.ising-dqpt and 6.hubbard; verbosity = 1 in 4.xxz-heisenberg so the pedagogical convergence-failure warnings survive without the ~400-line iteration logs - cite Essler-Frahm-Goehmann-Kluemper-Korepin for the Lieb-Wu energy integral (the empty 'Eq. (6.82) in []()' link) - replace the two xy-finiteT derivation todos with Lieb-Schultz-Mattis (1961) references; drop the stale figure todo Rendered index.md pages intentionally not regenerated here (expensive); the examples pipeline will pick these up on its next run via Cache.toml. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
Maintainer decision 2026-07-04: Discussions (already enabled on the repo) is the community venue; questions go there, bugs to the issue tracker. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
…tually apply Re-renders 1.ising-cft, 3.ising-dqpt, 4.xxz-heisenberg, 6.hubbard and 7.xy-finiteT with the verbosity/citation/todo changes: raw iteration logs are gone, the xxz failure demo keeps its one-line 'VUMPS cancel' / 'CG: not converged' warnings, and the Essler et al. and Lieb-Schultz-Mattis references render. The Random.seed! lines in 4.xxz-heisenberg and 6.hubbard were '#src'-only, which Literate strips from the executed markdown - renders were never seeded, and an unlucky draw NaN'd the xxz GradientGrassmann failure demo into a LAPACK error mid-pipeline. The seeds are now regular executed code. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
make.jl computed quantum_pages/classic_pages from readdir but never used them; the Examples nav entry was a single leaf page, so the rendered site showed no children in the sidebar, unlike every other section. Wire the lists in as Overview + Quantum (1+1)d + Classical (2+0)d groups (verified against the generated VitePress sidebar config). Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
Collapse the five top-level FiniteMPS sections into a single '## 1. A finite MPS' section with '###' subheadings, matching the structure of the infinite, window, and multiline sections, and renumber the remaining sections. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
Task recipes for find_groundstate: keyword-form heuristic, explicit DMRG/DMRG2/VUMPS/IDMRG/IDMRG2/GradientGrassmann configuration, &-chaining, verbosity/tolerance control. All 12 @example blocks verified against real MPSKit; physics claims salvaged from man/algorithms.md carry REVIEW flags. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
Recipes for timestep/time_evolve with TDVP/TDVP2, bond growth during evolution, infinite-state evolution, imaginary time, and time-evolution MPOs (WII/TaylorCluster/WI) applied via approximate. All 11 @example blocks verified against real MPSKit; physics claims carry REVIEW flags. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
Recipes for QuasiparticleAnsatz (infinite gap, dispersion scan, charged Z2 sector), finite-chain excitations (finite QP, FiniteExcited, ChepigaAnsatz/2), and variance quality checks; domain-wall usage is prose-only pending in-repo test coverage. All 11 @example blocks verified against real MPSKit. Note: verification exposed a numerical bug — find_groundstate on InfiniteMPS at g=10, chi=12 hits a LAPACK SVD ArgumentError inside the auto-chained GradientGrassmann step (over-parametrized bond dimension on a near-product state); reproducible across seeds and single-threaded. The recipe uses g=2.0 to avoid it. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
Router page listing every how-to page and its numbered recipes, grouped by theme, with a missing-recipe issue invitation. All @ref anchors verified; no code blocks. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
New Concepts section with the finite/infinite x task decision table and per-task prose salvaged from man/algorithms.md. Zero code blocks. Every physics/convergence claim carries a REVIEW flag (26 total) for maintainer vetting per CLAUDE.md; dropped-claim inventory in a trailing comment. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
Hand-held TDVP quench: TFIM ground state at g=0.5, quench to g=2.0, explicit 40-step timestep loop tracking mid-chain transverse magnetization, plotted with Plots. Verified end-to-end twice: the initial sigma-z story was rewritten to track sigma-x after verification showed DMRG at D=16 converges to the symmetric ground state (flat sigma-z trace); the sigma-x trace shows order-1 relaxation dynamics (0.26 -> peak 0.61 -> plateau 0.49). Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
Hand-held dispersion walk-through on the infinite TFIM at g=2: single momentum gap, 16-momentum sweep, plot against the exact Jordan-Wigner dispersion. Verified end-to-end; the k=0 gap matches 2(g-1) to 1e-11. Physics claims (phase, ansatz framing, exact formula) carry REVIEW flags. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
Flagship TFIM redone with explicit Z2 symmetry: graded spaces, energy agreement with the trivial run (1e-14), sector-resolved virtual space and entanglement spectrum, and the charged-sector excitation payoff. Plan deviation noted in-file: MPSKitModels' transverse_field_ising only supports Trivial/Z2Irrep/FermionParity, so the plan's U(1) framing is replaced by Z2; U(1)/SU(2) are pointed to via states how-to and examples. All 13 @example blocks verified twice (unseeded RNG). Also replaces the two TODO(link) stubs in thermodynamic_limit.md with real links to the new excitations and using-symmetries tutorials. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
content-wave1 folded the five FiniteMPS construction recipes into one section; mirror that in the index listing. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
- lead the hero tagline and feature cards with the finite/infinite and symmetry differentiators; drop emoji icons; add a performance card - rebuild the example as build -> optimize -> measure sections, using a from-scratch FiniteMPOHamiltonian and an entanglement-entropy plot - add a "Beyond this example" section hinting at infinite systems, symmetries, and fermions, and a "Citing MPSKit" section - lead the where-next and beyond bullets with their links; tighten the intro; drop TensorOperations from install (@tensor is re-exported) Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
- author four green SVG line icons (finite/infinite, symmetry, algorithm suite, performance) and wire them into the hero features frontmatter as icon.src; VitePress renders them in its default soft icon box - add an MPS tensor-network diagram (assets/mps.svg) after the "A first calculation" intro, with colours that work in both themes Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
…entry points Reference-depth pass (IMPROVEMENT_PLAN W4). find_groundstate now documents its keyword defaults, the previously undocumented `trscheme` keyword, and the full automatic algorithm-selection heuristic. Adds runnable jldoctest examples to the first-touch entry points that lacked them: FiniteMPS, InfiniteMPS, FiniteMPOHamiltonian/InfiniteMPOHamiltonian, changebonds, and timestep. Every golden value is a real run; the whole doctest(MPSKit) suite passes. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
Begins retiring the man/ section (IMPROVEMENT_PLAN W4). Splits man/parallelism.md along the Diátaxis seam: - concepts/parallelism_model.md — the Julia/BLAS thread interaction, where MPSKit parallelizes (OhMyThreads over sites), sector-level parallelism, and why memory pressure arises. - howto/parallelism_gpu.md — recipes for BLAS threads, set_scheduler!, threadinfo diagnostics, OutOfMemory mitigation, and an experimental Adapt-based GPU note (marked with a warning admonition). Wires both into the nav and the how-to recipe index; unwires man/parallelism.md (kept on disk pending review). Physics/performance claims carry <!-- REVIEW --> flags for maintainer sign-off. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
Replaces the (already build-disabled) man/environments.md with a Diátaxis concept page: what environment objects are (cached partial contractions), why algorithms take and return an optional environments argument, the finite ===-identity cache and its in-place-mutation pitfall, and how infinite environments differ (iterative fixed-point solves, no auto-recompute). Re-derives the current API against src/ — the legacy page carried stale calls (poison!(state,i), recalculate!(cache,state), cache.tol) that are dropped or reframed to the real internal signatures. Uncertain points (infinite-env precision control, exact invalidation route) carry <!-- REVIEW --> flags. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
Salvages the conceptual heart of man/states.md into a Diátaxis concept page
on MPS gauge freedom and canonical forms: the C·C⁻¹ gauge insertion, the
left/right isometry forms (AL/AR), the center bond tensor C and center-site
AC = AL·C = C·AR, automatic ("automagic") gauge management, and the
center-gauge overlap insight (dot(state,state) = dot(C,C) at any bond).
The gauge-relation checks are exact identities for any valid gauged MPS, so
they are written as jldoctest blocks returning `true` and verified by the full
doctest suite (green). Construction recipes and type reference are left to
howto/states.md and lib/states.md respectively; internal field-layout details
are dropped. Two diagrams copied in with text descriptions; image leg
convention and the finite-vs-infinite recompute wording carry REVIEW flags.
Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
Salvages the conceptual core of man/operators.md into a Diátaxis concept page: what an MPO is (finite vs infinite, two physical + two virtual legs), the gauge non-uniqueness caveat, virtual-dimension growth under products/sums, and — the centrepiece — the Jordan-block MPO-Hamiltonian structure presented as math with the finite-state-automaton reading (D→1-site, C·B→2-site, C·Aᵏ·B→(k+2)-site), the explicit TFIM W matrix, boundary vectors, and H = V_L W^⊗N V_R. Keeps the Symbolics expansion as a run-verified @example, and covers the sparse BlockTensorMap/JordanMPOTensor block structure. Construction recipes (incl. the 2D lattice example) are left to howto/hamiltonians.md; type reference to lib/operators.md; the legacy WIP-stub section is dropped. Physics/convention claims (virtual-dim growth law, automaton index convention, long-range decay/power-law approximation) carry REVIEW flags. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
Replaces man/intro.md with a Diátaxis concept page that lowers the TensorKit cliff. Part A takes the positive path first — TensorMap as a linear map, the spin-1/2 ℂ^2 running example, then the ℤ₂ symmetric-tensor payoff — and only afterwards introduces the domain/codomain partition mismatch as a diagnostic (reframing the legacy page, which opened with two errors). Part B leads with the planarity/fermion-sign rationale for the Vₗ ⊗ P ← P ⊗ Vᵣ ordering, then shows the MPS/bond/MPO tensor diagrams, each with a math leg-order fallback. All code is verified: four jldoctest blocks pass the full doctest suite and the three @example blocks were run standalone. Fixes a latent legacy bug (the old permute(t2,(1,2,3),()) does not actually make the addition succeed). The planarity/fermion claim and the three image conventions carry REVIEW flags. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
The Manual pages have been superseded by the tutorials, how-to guides, concept pages, and library reference built over waves 1-3: - intro.md → concepts/vector_spaces.md - states.md → concepts/matrix_product_states.md - operators.md → concepts/operators_and_hamiltonians.md - algorithms.md → concepts/algorithm_landscape.md + how-tos + lib/ - environments.md → concepts/environments.md - parallelism.md → concepts/parallelism_model.md + howto/parallelism_gpu.md Removes the Manual group from the nav, deletes the man/ sources and their images (finite_mps_definition/mps_gauge_freedom copied into concepts/; the D_*_strided/blas threading plots were unreferenced), and repoints the landing page "Where next" router from the manual to the concept pages. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
The landing-page MPS diagram used a bare relative `assets/mps.svg`, which Rollup treats as a module import and fails to resolve, breaking the full VitePress build. Use an explicit-relative `./assets/mps.svg` (base-path independent, unlike an absolute `/assets/...`), matching the pattern the concept pages use for `../assets/...`. Full `makedocs` build now completes. Co-Authored-By: Claude Opus 4.8 (1M context) <noreply@anthropic.com>
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Wave 1 of the documentation restructure (per
docs/RESTRUCTURE_PLAN.md).Opening as a draft so the Documenter/Vitepress PR preview build runs and the new pages can be reviewed online. Once CI finishes, the preview is deployed to:
https://quantumkithub.github.io/MPSKit.jl/previews/PR449/What's included
@autodocs)Notes
@example/jldoctestand were verified against real MPSKit.<!-- REVIEW: ... -->.🤖 Generated with Claude Code