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Unpin nginx version in container
Docker build and test
#737:
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6m 13s
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6m 13s
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Pin laxydl apptainer image to 41d7be5 (416 Range fix)
Docker build and test
#736:
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develop
develop
6m 18s
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Pin laxydl apptainer image to 41d7be5 (416 Range fix)
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#735:
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6m 37s
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6m 37s
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Update CHANGELOG for run_job.sh jq-null and laxydl 416 fixes
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#734:
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41d7be5
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6m 10s
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develop
6m 10s
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Update CHANGELOG for run_job.sh jq-null and laxydl 416 fixes
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#733:
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41d7be5
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7m 3s
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Recover from 416 Range Not Satisfiable during resumed downloads
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#732:
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5m 39s
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Fix run_job.sh crash when optional pipeline_config.json keys are absent
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#731:
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5m 44s
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Point annotation corpus CDN fetches at master, not a feature branch
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#730:
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6m 0s
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Point annotation corpus CDN fetches at master, not a feature branch
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#729:
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6m 53s
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Add antisense ncRNA gene to E5_eukaryote_ncrna_ids corpus fixture
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#728:
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Send job description as top-level PipelineRun field in laxycli
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#727:
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7m 13s
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Strip quoted GFF3 attribute values in filter_annotation_features.py
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#726:
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Document corrected gene_name fix and full corpus e2e run results
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#725:
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6m 48s
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6m 48s
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Correct gene_name fix: nf-core doesn't split multi-value gtf_extra_at…
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#724:
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5m 58s
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Fix gene_name resolving to gene_id for GFF3 input
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#723:
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6m 49s
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Document end-to-end validation results for the GFF3 biotype fixes
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#722:
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Propagate biotype attribute to child rows so GFF3 biotypes are populated
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#721:
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Skip nf-core's internal biotype QC for GFF3 input to avoid a hard fai…
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#720:
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Fix paired-end read orientation bug breaking corpus e2e mapping
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#719:
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6m 50s
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Fix issue #295 (Send to Degust failure).
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#718:
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6m 14s
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6m 14s
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Promote E7_eukaryote_flat_pseudogene to expect_success: true
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#717:
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Generate missing synthetic reads for E7_eukaryote_flat_pseudogene
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#716:
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Use containerized laxydl for 3.10.1/3.12.0 downloads
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#715:
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6m 19s
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Fix nf-core download flags and biotype attribute for GFF3 input
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#714:
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laxydl: correct trio pin to 0.22.2
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#713:
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