Skip to content

Disable multienrichjam install code on setup page too - #40

Merged
hosseinvk merged 1 commit into
mainfrom
hosseinvk/disable-multienrichjam-setup-page
Aug 10, 2026
Merged

Disable multienrichjam install code on setup page too#40
hosseinvk merged 1 commit into
mainfrom
hosseinvk/disable-multienrichjam-setup-page

Conversation

@hosseinvk

Copy link
Copy Markdown
Collaborator

Summary

  • Comments out install.packages("remotes")/remotes::install_github(...) in the setup page's install-multienrichjam chunk, matching the fix already applied to the equivalent chunk in 10-clusterprofiler.Rmd (PR Disable multienrichjam install code, exclude it from workshop.R #39). Chunk already had eval = FALSE, but that only affects knitting, not manual execution.
  • No <!--omit-begin/end--> markers needed here, since 01-02-setup.Rmd is already fully excluded from workshop.R generation.

Test plan

  • Full bookdown::render_book() completes cleanly.
  • CI bookdown-render job to be confirmed green before merge.

Comments out install.packages("remotes")/remotes::install_github(...)
in the setup page's install-multienrichjam chunk, matching the same
fix already applied to the equivalent chunk in 10-clusterprofiler.Rmd.
This chunk already had eval = FALSE, but that only affects knitting,
not manual execution. No <!--omit-begin/end--> markers needed here,
since 01-02-setup.Rmd is already fully excluded from workshop.R
generation.
@hosseinvk
hosseinvk merged commit 8b4d695 into main Aug 10, 2026
1 of 2 checks passed
@hosseinvk
hosseinvk deleted the hosseinvk/disable-multienrichjam-setup-page branch August 10, 2026 12:56
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

1 participant