Updated ARC Zeus submit script#42
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Pull request overview
Updates the Zeus ARC PBS submit script to target the intended queue/host and to use the correct ARC installation path variable from the Zeus environment setup.
Changes:
- Switch PBS queue to
alon_q. - Constrain the job to run on host
n170. - Update ARC invocation from
$arc_codeto$arc_path.
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| python $arc_code/ARC.py input.yml | ||
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| python $arc_path/ARC.py input.yml |
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submit.sh calls python $arc_path/ARC.py ..., but in Servers/Zeus/.bashrc this repo exports arc_path as '~/Code/ARC/' (tilde inside quotes). Bash does not perform tilde expansion on values coming from variables, so this can resolve to a non-existent path at runtime. Prefer exporting arc_path as an absolute path (e.g., using $HOME), or set/normalize arc_path in this script before invoking Python so the job doesn't fail due to an unexpanded ~.
| python $arc_path/ARC.py input.yml | |
| arc_path="${arc_path/#\~/$HOME}" | |
| python "$arc_path/ARC.py" input.yml |
corrected arc_code to arc_path, added n170
'~' inside quotes is not tilde-expanded, so $arc_path/ARC.py resolved to a literal ~/... path that python cannot open. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
Molpro 2026.1 is installed under /usr/local/molpro26 (group-only); molpro22/molpro24 remain for the old versions. Co-Authored-By: Claude Fable 5 <noreply@anthropic.com>
corrected arc_code to arc_path, added n170