Let cratis init skip a context reference that would be overwritten - #82
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Some repositories generate their instruction files from a shared corpus and propagate them across repositories, so appending @CHRONICLE.md to one is undone by the next sync. That is worse than never adding it: the reference disappears at an unpredictable later moment, and whoever notices sees a project that was configured and silently is not. --no-context writes the skill and prompt and leaves the instruction file alone. The skip is reported rather than silent, and names what to do instead, because a project with the catalog on disk and nothing pointing at it looks configured and loads nothing. The four flags now travel as a record. They all read as bare booleans at the call site, where transposing two produces a configuration that looks right and is not.
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cratis init --no-contextwrites the skill and prompt files but leaves the tool's instruction file alone, for repositories that generateAGENTS.md,CLAUDE.mdor.github/copilot-instructions.mdfrom a shared corpus and propagate them. Appending to such a file is undone by the next sync — the reference disappears at an unpredictable later moment, which is harder to notice than never adding it. The skip is reported and names what to add instead, so the catalog does not end up on disk with nothing pointing at it. (cratis init writes the context reference into files that are generated, where it will be overwritten #81)