From e20a6023746ad04e075def8e65112b362b1a1bc3 Mon Sep 17 00:00:00 2001 From: frederick Date: Wed, 19 Aug 2026 16:25:50 +0100 Subject: [PATCH] removing hard coded path to dead pixel mask and instead trying to load it from the container --- e02/templates/Notebook_simple.yaml | 8 +------- 1 file changed, 1 insertion(+), 7 deletions(-) diff --git a/e02/templates/Notebook_simple.yaml b/e02/templates/Notebook_simple.yaml index 9d821d7..035678d 100644 --- a/e02/templates/Notebook_simple.yaml +++ b/e02/templates/Notebook_simple.yaml @@ -27,10 +27,6 @@ spec: hostPath: path: "{{`{{ workflow.parameters.visitdir }}`}}" type: Directory - - name: software - hostPath: - path: /dls_sw/e02/medipix_mask - type: Directory volumeClaimTemplates: - metadata: name: tmp @@ -77,8 +73,6 @@ spec: mountPath: "{{`{{ workflow.parameters.visitdir }}`}}" - name: tmp mountPath: /tmp - - name: software - mountPath: /dls_sw/e02/medipix_mask command: [bash] source: | ERROR_TXT="raise error" @@ -89,7 +83,7 @@ spec: -p visit "{{`{{ workflow.parameters.visitdir }}`}}" \ -p sample "{{`{{ workflow.parameters.sample }}`}}" \ -p timestamp "{{`{{workflow.parameters.timestamp}}`}}" \ - -p maskpath /software/29042024_12bitmask2.h5 \ + -p maskpath "/home/ruska/29042024_12bitmask2.h5" \ -p lower "{{`{{workflow.parameters.thresh_lower}}`}}" \ -p upper "{{`{{workflow.parameters.thresh_upper}}`}}" \ > $OUTPUT/papermill.log 2>&1