Hello,
I am currently running smartpca on a HPC using slurm.
smartpca version is 18140, and I use the following parameter file.
altnormstype: NO
numoutevec: 20
numoutlieriter: 0
numoutlierevec: 0
outliersigmathresh: 6.0
numthreads: 8
qtmode: 0
lsqproject: YES
I am not used to multithreading and running jobs in parallel.
I wanted to run threads in parallel, so I tried assigning 8 cpu per job, however when I login the computing nodes, only one processor is working per job, even though the log files say the job will work on 8 threads.
Is there another option to assign each thread to a cpu, or is it blocked somehow by my options?
Thank you in advance.
Hello,
I am currently running smartpca on a HPC using slurm.
smartpca version is 18140, and I use the following parameter file.
altnormstype: NO
numoutevec: 20
numoutlieriter: 0
numoutlierevec: 0
outliersigmathresh: 6.0
numthreads: 8
qtmode: 0
lsqproject: YES
I am not used to multithreading and running jobs in parallel.
I wanted to run threads in parallel, so I tried assigning 8 cpu per job, however when I login the computing nodes, only one processor is working per job, even though the log files say the job will work on 8 threads.
Is there another option to assign each thread to a cpu, or is it blocked somehow by my options?
Thank you in advance.