diff --git a/docs/communities/Rhodopseudomonas_Geobacter_Magnetite_Redox_Coculture.html b/docs/communities/Rhodopseudomonas_Geobacter_Magnetite_Redox_Coculture.html index fa81c477..9b5d63d0 100644 --- a/docs/communities/Rhodopseudomonas_Geobacter_Magnetite_Redox_Coculture.html +++ b/docs/communities/Rhodopseudomonas_Geobacter_Magnetite_Redox_Coculture.html @@ -409,6 +409,7 @@

Rhodopseudomonas-Geobacter Magnetite Redox Coculture

+ @@ -643,6 +644,15 @@

Magnetite-Mediated Electron Sharing

+
+ Downstream Effects: + +
+ Biogeochemical Battery Function +
+ +
+

Evidence

@@ -718,6 +728,19 @@

Phototrophic Magnetite Fe(II) Oxidation

+
+ Downstream Effects: + +
+ Anaerobic Magnetite Fe(III) Reduction +
+ +
+ Biogeochemical Battery Function +
+ +
+

Evidence

@@ -784,6 +807,19 @@

Anaerobic Magnetite Fe(III) Reduction

+
+ Downstream Effects: + +
+ Phototrophic Magnetite Fe(II) Oxidation +
+ +
+ Biogeochemical Battery Function +
+ +
+

Evidence

diff --git a/kb/communities/Rhodopseudomonas_Geobacter_Magnetite_Redox_Coculture.yaml b/kb/communities/Rhodopseudomonas_Geobacter_Magnetite_Redox_Coculture.yaml index 24cdbe9a..e372d2d0 100644 --- a/kb/communities/Rhodopseudomonas_Geobacter_Magnetite_Redox_Coculture.yaml +++ b/kb/communities/Rhodopseudomonas_Geobacter_Magnetite_Redox_Coculture.yaml @@ -143,6 +143,12 @@ ecological_interactions: term: id: GO:0006826 label: iron ion transport + downstream: + - target: Biogeochemical Battery Function + description: > + Magnetite-mediated electron sharing between the phototrophic Fe(II) + oxidizer and the anaerobic Fe(III) reducer manifests as the emergent, + reusable mineral electron-storage system (the "battery"). evidence: - reference: PMID:25814583 supports: SUPPORT @@ -178,6 +184,16 @@ ecological_interactions: term: id: GO:0015979 label: photosynthesis + downstream: + - target: Anaerobic Magnetite Fe(III) Reduction + description: > + Light-driven oxidation of magnetite Fe(II) to Fe(III) supplies the + oxidized Fe(III) that G. sulfurreducens subsequently uses as its anaerobic + electron acceptor. + - target: Biogeochemical Battery Function + description: > + TIE-1 phototrophic Fe(II) oxidation is one half of the reversible redox + cycling that charges magnetite toward its oxidized state. evidence: - reference: PMID:25814583 supports: SUPPORT @@ -213,6 +229,17 @@ ecological_interactions: term: id: GO:0006826 label: iron ion transport + downstream: + - target: Phototrophic Magnetite Fe(II) Oxidation + description: > + G. sulfurreducens reduction of magnetite Fe(III) regenerates the reduced + Fe(II) electron donor for TIE-1, closing the reversible redox loop (the + process is reversible in co-cultures). + - target: Biogeochemical Battery Function + description: > + Fe(III) reduction is the complementary half-reaction that restores the + mineral's reduced electron-storage capacity, making the magnetite store + reusable. evidence: - reference: PMID:25814583 supports: SUPPORT